Dovetailing biology and chemistry: integrating the Gene Ontology with the ChEBI chemical ontology
نویسندگان
چکیده
منابع مشابه
ChEBI: a chemistry ontology and database
The bioinformatics community has developed a policy of open access and open data since its inception. This is contrary to chemoinformatics which has traditionally been a closed-access area. In 2004, two complementary open access databases were initiated by the bioinformatics community, ChEBI [1] and PubChem. PubChem serves as automated repository on the biological activities of small molecules ...
متن کامل?Logic and Formal Ontology: Is the Final Formal Ontology Possible
Musa Akrami AbstractMany philosophers and logicians have contemplated the relationship between ontology and logic. The author of this paper, working within a Bolzanoan-Husserlian tradition of studying both ontology and logic, considers ontology as the science of the most general features of beings and the most general relations among them. He considers logic as the science concernin...
متن کاملThe ChEBI Ontology: An Ontology for Chemistry within a Biological Context
Chemical Entities of Biological Interest (ChEBI) is a freely available database of molecular entities and chemical concepts, which is manually annotated to a high standard of quality and is non-redundant, thus differentiating it from other publicly available chemistry resources. It focuses specifically on those chemical entities which are of interest to the life sciences community, including me...
متن کاملModular Extensions to the ChEBI Ontology
ChEBI is an ontology of chemical entities of biological interest. It includes a structure-based and a role-based classification of chemical entities including molecules, ions and salts. This poster showcases recent developments and forthcoming enhancements to the ontology, focusing on modular extensions of the content. These extensions are being developed in support of error detection and consi...
متن کاملSemantic access to chemistry data with the ChEBI ontology and web services
The Chemical Entities of Biological Interest (ChEBI) ontology is an ontology of chemical entities and their roles, being developed at the European Bioinformatics Institute (EBI). Recent developments include a submission tool for direct user submissions and enhancements to the search facilities available by web services.
متن کاملذخیره در منابع من
با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید
ژورنال
عنوان ژورنال: BMC Genomics
سال: 2013
ISSN: 1471-2164
DOI: 10.1186/1471-2164-14-513